Three-dimensional structures

Currently 39 structures deposited at the Protein Data Bank and 1 structure deposited at the Cambridge Structural Database

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Protein Data Bank (PDB) ID codes starting by 7xxx

7O7C
7O7C

Name: A. victoria fluorescent protein rsEGFP2 Description: Crystal structure of rsEGFP2 mutant V151A in the non-fluorescent off-state determined by synchrotron radiation at 100K X-ray source: ESRF Beamline xxxx Space group: P21 21 21 Unit cell: a=xx b=xx c=xx Resolution: xx Å

7O7D
7O7D

Name: A. victoria fluorescent protein rsEGFP2 Description: Crystal structure of rsEGFP2 mutant V151A in the fluorescent on-state determined by synchrotron radiation at 100K X-ray source: ESRF Beamline xxxx Space group: P21 21 21 Unit cell: a=xx b=xx c=xx Resolution: xx Å

7O7E
7O7E

Name: A. victoria fluorescent protein rsEGFP2 Description: Crystal structure of rsEGFP2 mutant V151L in the fluorescent on-state determined by synchrotron radiation at 100K X-ray source: ESRF Beamline xxxx Space group: P21 21 21 Unit cell: a=xx b=xx c=xx Resolution: xx Å

7O7H
7O7H

Name: A. victoria fluorescent protein rsEGFP2 Description: Crystal structure of rsEGFP2 mutant V151L in the non-fluorescent off-state determined by synchrotron radiation at 100K X-ray source: ESRF Beamline xxxx Space group: P21 21 21 Unit cell: a=xx b=xx c=xx Resolution: xx Å

Protein Data Bank (PDB) ID codes starting by 6xxx

6YN6
6YN6

Name: LdcI Description: Inducible lysine decarboxylase LdcI decamer, pH 5.7 Electron microscopy map 200-kV Tecnai F20 electron microscope Resolution: 3.28 Å

6YN5
6YN5

Name: LdcI Description: Inducible lysine decarboxylase LdcI decamer, pH 7.0 Electron microscopy map 200-kV Tecnai F20 electron microscope Resolution: 2.70 Å

6T3A
6T3A

Name: A. victoria fluorescent protein rsEGFP2 Description: Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX X-ray source: SACLA Beamline BL3-EH4c Space group: P21 21 21 Unit cell: a=52.0 b=62.9 c=72.1 Resolution: 1.85 Å

6T39
6T39

Name: A. victoria fluorescent protein rsEGFP2 Description: Crystal structure of rsEGFP2 in its off-state determined by SFX X-ray source: SACLA Beamline BL3-EH4c Space group: P21 21 21 Unit cell: a=51.7 b=62.9 c=71.7 Resolution: 1.60 Å

6GP1
6GP1

Name: L. hemprichii fluorescent protein mEos4b Description: mEos4b in the red long-lived dark state X-ray source: ESRF Beamline ID23-1 Space group: P21 21 21 Unit cell: a=38.7 b=58.29 c=104.03 Resolution: 1.5 Å

6GP0
6GP0

Name: L. hemprichii fluorescent protein mEos4b Description: mEos4b in the red fluorescent state X-ray source: ESRF Beamline ID23-1 Space group: P21 21 21 Unit cell: a=38.61 b=57.9 c=102.64 Resolution: 1.5 Å

6GOZ
6GOZ

Name: L. hemprichii fluorescent protein mEos4b Description: mEos4b in the green long-lived dark state X-ray source: ESRF Beamline ID23-1 Space group: P21 21 21 Unit cell: a=38.7 b=58.29 c=104.03 Resolution: 1.5 Å

6GOY
6GOY

Name: L. hemprichii fluorescent protein mEos4b Description: mEos4b in the green fluorescent state X-ray source: ESRF Beamline ID23-1 Space group: P21 21 21 Unit cell: a=38.6 b=58.09 c=103.27 Resolution: 1.65 Å

Protein Data Bank (PDB) ID codes starting by 5xxx

5O89
5O89

Name: A. victoria fluorescent protein rsEGFP2 Description: XFEL structure of rsEGFP2 in the on-state X-ray source: LCLS Beamline CXI Space group: P21 21 21 Unit cell: a=51.7 b=62.3 c=71.9 Resolution: 1.7 Å

5O8C
5O8C

Name: A. victoria fluorescent protein rsEGFP2 Description: XFEL structure of rsEGFP2 1 ps after 400-nm irradiation of the off-state X-ray source: LCLS Beamline CXI Space group: P21 21 21 Unit cell: a=51.5 b=62.8 c=71.8 Resolution: 1.7 Å

5O8B
5O8B

Name: A. victoria fluorescent protein rsEGFP2 Description: XFEL structure of rsEGFP2 in the excited state 1 ps following 400-nm illumination X-ray source: LCLS Beamline CXI Space group: P21 21 21 Unit cell: a=51.5 b=62.8 c=71.8 Resolution: 1.7 Å

5O8A
5O8A

Name: A. victoria fluorescent protein rsEGFP2 Description: XFEL structure of rsEGFP2 in the off-state X-ray source: LCLS Beamline CXI Space group: P21 21 21 Unit cell: a=51.5 b=62.8 c=71.8 Resolution: 1.7 Å

5FVI
5FVI

Name: L. hemprichii fluorescent protein IrisFP Description: Synchrotron structure of IrisFP in grease at 100K X-ray source: ESRF Beamline ID29 Space group: P21 21 21 Unit cell: a=78.6 b=95.9 c=139.9 Resolution: 2.4 Å

5FVG
5FVG

Name: L. hemprichii fluorescent protein IrisFP Description: Synchrotron structure of IrisFP without grease at 100K X-ray source: ESRF Beamline ID29 Space group: P21 21 21 Unit cell: a=78.1 b=96.3 c=140.2 Resolution: 1.9 Å

5FVF
5FVF

Name: L. hemprichii fluorescent protein IrisFP Description: XFEL structure of IrisFP in grease at room temperature X-ray source: SACLA Beamline BL3 Space group: P21 21 21 Unit cell: a=83.3 b=97.8 c=142.7 Resolution: 2.75 Å

5DU0
5DU0

Name: A. victoria fluorescent protein rsFolder Description: Non-fluorescent off-state X-ray source: ESRF Beamline ID29 Space group: C2 Unit cell: a=141.29 b=134.8 c=51.05 Resolution: 2.35 Å

5DTZ
5DTZ

Name: A. victoria fluorescent protein rsFolder Description: Fluorescent on-state X-ray source: ESRF Beamline ID29 Space group: C2 Unit cell: a=142.47 b=134.56 c=51.72 Resolution: 1.5 Å

5DTY
5DTY

Name: A. victoria fluorescent protein rsEGFP2 Description: Non-fluorescent off-state X-ray source: ESRF Beamline ID23-2 Space group: P21 21 21 Unit cell: a=51.19 b=62.81 c=70.55 Resolution: 1.5 Å

5DTX
5DTX

Name: A. victoria fluorescent protein rsEGFP2 Description: Fluorescent on-state X-ray source: ESRF Beamline ID23-2 Space group: P21 21 21 Unit cell: a=50.99 b=62.91 c=70.84 Resolution: 1.45 Å

5DTL
5DTL

Name: L. hemprichii fluorescent protein mEos2-A69T Description: Lower blinking variant of mEos2 X-ray source: ESRF Beamline ID23-2 Space group: P1 Unit cell: a=73.37 b=96.50 c=100.06 Resolution: 2.7 Å

Protein Data Bank (PDB) ID codes starting by 4xxx

4R6B
4R6B

Name: L. hemprichii fluorescent protein IrisFP Description: Photoresistant variant M159A X-ray source: ESRF Beamline ID14-4 Space group: P21 21 21 Unit cell: a=86.70 b=96.35 c=139.43 Resolution: 2.0 Å

4LJD
4LJD

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP bleached in aerobic conditions X-ray source: SLS Beamline PXII3 Space group: P21 21 21 Unit cell: a=85.99 b=96.53 c=140.19 Resolution: 2.5 Å

4LJC
4LJC

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP bleached by X-rays X-ray source: ESRF Beamline ID29 Space group: P21 21 21 Unit cell: a=86.64 b=96.81 c=140.69 Resolution: 1.86 Å

4LJB
4LJB

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP bleached in anaerobic conditions X-ray source: ESRF Beamline ID14-2 Space group: P21 21 21 Unit cell: a=86.09 b=96.41 c=140.03 Resolution: 1.9 Å

Protein Data Bank (PDB) ID codes starting by 3xxx

3TMT
3TMT

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP, blinked chromophore X-ray source: ESRF Beamline ID14-2 Space group: P21 21 21 Unit cell: a=84.84 b=96.51 c=140.00 Resolution: 2.0 Å

3TMR
3TMR

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP, native chromophore X-ray source: ESRF Beamline ID14-2 Space group: P21 21 21 Unit cell: a=84.84 b=96.51 c=140.00 Resolution: 2.0 Å

3P8U
3P8U

Name: L. hemprichii fluorescent protein mEosFP Description: Monomeric EosFP, green fluorescent X-ray source: ESRF Beamline ID14-3 Space group: P21 21 21 Unit cell: a=86.45 b=96.82 c=140.43 Resolution: 2.25 Å

Protein Data Bank (PDB) ID codes starting by 2xxx

2VZX
2VZX

Name: Dendronephthya sp. fluorescent protein Dendra2 Description: Dendra2 green fluorescent X-ray source: ESRF Beamline ID14-4 Space group: P1 Unit cell: a=71.26 b=76.85 c=92.50 Resolution: 2.00 Å

2VVJ
2VVJ

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP red, cis conformation X-ray source: ESRF Beamline ID23-1 Space group: P21 21 21 Unit cell: a=85.67 b=96.62 c=140.17 Resolution: 2.0 Å

2VVI
2VVI

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP green, trans X-ray source: ESRF Beamline ID14-3 Space group: P21 21 21 Unit cell: a=81.31 b=96.38 c=140.61 Resolution: 2.00 Å

2VVH
2VVH

Name: L. hemprichii fluorescent protein IrisFP Description: IrisFP green, cis conformation X-ray source: ESRF Beamline ID14-3 Space group: P21 21 21 Unit cell: a=86.34 b=96.55 c=139.83 Resolution: 1.80 Å

2JI3
2JI3

Name: D. baarsi Superoxide reductase (SOR, EC # 1.15.1.2) Description: SOR E114A complexed with an iron-peroxide intermediate X-ray source: ESRF Beamline ID14-4 Space group: I2 2 2 Unit cell: a=69.45 b=82.90 c=202.66 Resolution: 1.95 Å

2JI2
2JI2

Name: D. baarsi Superoxide reductase (SOR, EC # 1.15.1.2) Description: SOR E114A X-ray source: ESRF Beamline ID29 Space group: I2 2 2 Unit cell: a=70.47 b=82.87 c=201.95 Resolution: 1.70 Å

2JI1
2JI1

Name: D. baarsi Superoxide reductase (SOR, EC # 1.15.1.2) Description: SOR wild-type X-ray source: ESRF Beamline ID14-1 Space group: I2 2 2 Unit cell: a=70.39 b=82.99 c=204.35 Resolution: 1.70 Å

Protein Data Bank (PDB) ID codes starting by 1xxx

1W2H
1W2H

Name: M. tuberculosis Thimidylate kinase (TMPK, EC # 2.7.4.9) Description: TMPK complexed with azidothymidine monophospate X-ray source: ESRF Beamline ID14-4 Space group: P31 2 1 Unit cell: a=63.52 b=64.52 c=195.37 Resolution: 2.0 Å

1W2G
1W2G

Name: M. tuberculosis Thimidylate kinase (TMPK, EC # 2.7.4.9) Description: TMPK complexed with deoxythimidine X-ray source: ESRF Beamline ID14-4 Space group: P31 2 1 Unit cell: a=63.87 b=63.87 c=195.34 Resolution: 2.1 Å

1VZI
1VZI

Name: D. baarsi Superoxide reductase (SOR, EC # 1.15.1.2) Description: SOR E47A complexed with chloride X-ray source: ESRF Beamline ID14-2 Space group: I41 2 2 Unit cell: a=123.61 b=123.61 c=73.02 Resolution: 1.15 Å

1VZH
1VZH

Name:D. baarsi Superoxide reductase (SOR, EC # 1.15.1.2) Description: SOR E47A complexed with ferrocyanide with active site expansion upon photoreduction X-ray source: ESRF Beamline ID14-4 Space group: P21 21 21 Unit cell: a=42.13 b=67.65 c=82.19 Resolution: 1.69 Å

1VZG
1VZG

Name: D. baarsi Superoxide reductase (SOR, EC # 1.15.1.2) Description: SOR E47A complexed with ferrocyanide X-ray source: ESRF Beamline ID14-4 Space group: P21 21 21 Unit cell: a=42.13 b=67.65 c=82.19 Resolution: 1.69 Å

Cambridge Crystallographic Data Center (CCSD)

729932
729932

Name: (μ-peroxo)(μ-hydroxo)bis[bis(bipyridyl) cobalt(III)] nitrate (HPBC) Description: Caged-oxygen compound X-ray source: Mo-target tube (λ=0.71 Å) Space group: P-1 Unit cell: a=11.0774 b=13.4851 c=14.5529